miRBase entry: rno-mir-3084b

Stem-loop rno-mir-3084b


Accession
MI0030360
Description
Rattus norvegicus rno-mir-3084b precursor miRNA
Gene family
MIPF0001536; mir-3084

Literature search
1 open access papers mention rno-mir-3084b
(1 sentences)

Sequence

130 reads, 11 reads per million, 81 experiments
caaauaGUUGAAGGUUAAUUAGCAGAGuaacugcauauaguaauuCUGCCAGUUCCCUUCAGACAAaaa
.......(((((((..((((.(((((((.((((....)))).))))))).)))).))))))).......

Structure
caaauaG       UU    A       a    c 
       UUGAAGG  AAUU GCAGAGu acug a
       |||||||  |||| ||||||| ||||  
       GACUUCC  UUGA CGUCuua ugau u
aaaAACA       -C    C       a    a 


Annotation confidence Not enough data
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Genome context
chr5: 86767029-86767097 [+]

Database links

Mature rno-miR-3084b-5p

Accession MIMAT0035743
Description Rattus norvegicus rno-miR-3084b-5p mature miRNA
Sequence 7 - GUUGAAGGUUAAUUAGCAGAG - 27
Evidence experimental
RNAseq-metaanalysis [1]

Mature rno-miR-3084b-3p

Accession MIMAT0035744
Description Rattus norvegicus rno-miR-3084b-3p mature miRNA
Sequence 46 - CUGCCAGUUCCCUUCAGACAA - 66
Evidence experimental
RNAseq-metaanalysis [1]

References

  1. PubMed ID: 23329697
    Rat mir-155 generated from the lncRNA Bic is 'hidden' in the alternate genomic assembly and reveals the existence of novel mammalian miRNAs and clusters
    "Uva P, Da Sacco L, Del Corno M, Baldassarre A, Sestili P, Orsini M, Palma A, Gessani S, Masotti A"
    "RNA (2013) 19:365-379