Stem-loop sequence rno-mir-3084a-2

AccessionMI0030359 (change log)
DescriptionRattus norvegicus miR-3084a-2 stem-loop
Gene family MIPF0001536; mir-3084
Literature search

1 open access papers mention rno-mir-3084a-2
(6 sentences)

Stem-loop 
   cacaua  -      uua   a       a    c 
5'       gu ugaagg   auu gcagagu acug a
         || ||||||   ||| ||||||| ||||  
3'       ca acuucc   uga cgucuua ugau u
   -aaaaa  g      -cc   c       a    a
Get sequence
Deep sequencing
3817 reads, 0 reads per million, 357 experiments
Confidence Annotation confidence: high
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Genome context
Coordinates (Rnor_6.0; GCA_000001895.4) Overlapping transcripts
chr6: 91633044-91633112 [-]
sense
ENSRNOT00000029880 ; Nemf-201; intron 18
Database links

Mature sequence rno-miR-3084a-5p

Accession MIMAT0035741
Sequence

7 -  

guugaagguuaauuagcagagu

 - 28

Get sequence
Deep sequencing702 reads, 140 experiments
Evidence experimental; RNAseq-metaanalysis [1]

Mature sequence rno-miR-3084b-3p

Accession MIMAT0035742
Sequence

44 -  

uucugccaguccccuucagaca

 - 65

Get sequence
Deep sequencing3441 reads, 348 experiments
Evidence experimental; RNAseq-metaanalysis [1]

References

1
PMID:23329697 "Rat mir-155 generated from the lncRNA Bic is 'hidden' in the alternate genomic assembly and reveals the existence of novel mammalian miRNAs and clusters" Uva P, Da Sacco L, Del Corno M, Baldassarre A, Sestili P, Orsini M, Palma A, Gessani S, Masotti A RNA. 19:365-379(2013).