Stem-loop sequence rno-mir-3084a-1

AccessionMI0030358 (change log)
DescriptionRattus norvegicus miR-3084a-1 stem-loop
Gene family MIPF0001536; mir-3084
Literature search

1 open access papers mention rno-mir-3084a-1
(6 sentences)

Stem-loop 
   -aaua  -      uuc   a       a    c 
5'      gu ugaagg   auu gcagagu acug a
        || ||||||   ||| ||||||| ||||  
3'      ca acuucc   uga cgucuua ugac u
   aaaaa  g      -cc   c       a    a
Get sequence
Deep sequencing
3812 reads, 0 reads per million, 357 experiments
Confidence Annotation confidence: high
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Genome context
Coordinates (Rnor_6.0; GCA_000001895.4) Overlapping transcripts
chr19: 43403103-43403169 [+]
sense
ENSRNOT00000023854 ; Sf3b3-201; intron 9
Database links

Mature sequence rno-miR-3084a-1-5p

Accession MIMAT0035739
Sequence

6 -  

uugaagguucauuagcagagua

 - 27

Get sequence
Deep sequencing347 reads, 138 experiments
Evidence experimental; RNAseq-metaanalysis [1]
Predicted targets

Mature sequence rno-miR-3084a-3p

Accession MIMAT0035740
Sequence

42 -  

uucugccaguccccuucagaca

 - 63

Get sequence
Deep sequencing10322 reads, 348 experiments
Evidence experimental; RNAseq-metaanalysis [1]

References

1
PMID:23329697 "Rat mir-155 generated from the lncRNA Bic is 'hidden' in the alternate genomic assembly and reveals the existence of novel mammalian miRNAs and clusters" Uva P, Da Sacco L, Del Corno M, Baldassarre A, Sestili P, Orsini M, Palma A, Gessani S, Masotti A RNA. 19:365-379(2013).