miRBase entry: mmu-mir-3154

Stem-loop mmu-mir-3154


Accession
MI0030343
Description
Mus musculus mmu-mir-3154 precursor miRNA
Gene family
MIPF0001387; mir-3154


Sequence

37 reads, 14 reads per million, 15 experiments
ggccccuccuucccaacccagcucccgcucaccccugccacgucaaaggaggCAGAAGGGGAGUCGGGAGCGGAgaggg
...(((((..(((.......((((((((((.((((((((.(......)..)))))..)))))).)))))))))))))))

Structure
ggc     cu   caaccca       -   a   --     -a gu 
   cccuc  ucc       gcucccg cuc ccc  cugcc  c  c
   |||||  |||       ||||||| ||| |||  |||||  |   
   gggag  AGG       CGAGGGC GAG GGG  GACgg  g  a
---     --   -------       U   -   AA     ag aa 


Annotation confidence Not enough data
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Genome context
chr2: 32318265-32318343 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mmu-mir-3154
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmu-miR-3154

Accession MIMAT0035714
Description Mus musculus mmu-miR-3154 mature miRNA
Sequence 53 - CAGAAGGGGAGUCGGGAGCGGA - 74
Evidence experimental
RNAseq-metaanalysis [1]
Database links
Predicted targets

References

  1. PubMed ID: 23329697
    Rat mir-155 generated from the lncRNA Bic is 'hidden' in the alternate genomic assembly and reveals the existence of novel mammalian miRNAs and clusters
    "Uva P, Da Sacco L, Del Corno M, Baldassarre A, Sestili P, Orsini M, Palma A, Gessani S, Masotti A"
    "RNA (2013) 19:365-379