Stem-loop pbv-mir-9651

Accession

MI0030341

Description

Python bivittatus pbv-mir-9651 precursor miRNA

Sequence

guggaaguuaagacuaUACUUUCAGGGAUCAUUUCUAUAGuaucuaacugGAGAAAUGCACUCGAAAGUGAUuggccgaacgaaccac
((((..(((..(.((((((((((.(((..(((((((.((((.....)))).)))))))..))))))))))..))))..)))...))))

Structure

    -aa   aa a   --       A   AU       A    a 
gugg   guu  g cua  UACUUUC GGG  CAUUUCU UAGu u
||||   |||  | |||  ||||||| |||  ||||||| |||| c
cacc   caa  c ggu  GUGAAAG CUC  GUAAAGA guca u
    aag   gc -   UA       -   AC       G    a 

Annotation confidence Not enough data

Genome context

KE959382.1: 59086-59173 [+]

Mature pbv-miR-9651-5p

• Accession: MIMAT0039098
• Description: Python bivittatus pbv-miR-9651-5p mature miRNA
• Sequence: 17 - UACUUUCAGGGAUCAUUUCUAUAG - 40
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-9651-3p

• Accession: MIMAT0039099
• Description: Python bivittatus pbv-miR-9651-3p mature miRNA
• Sequence: 51 - GAGAAAUGCACUCGAAAGUGAU - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196