miRBase entry: pbv-mir-1641

Stem-loop pbv-mir-1641


Accession
MI0030330
Description
Python bivittatus pbv-mir-1641 precursor miRNA


Sequence

auacagggcuuuuccUGGGAUCAAUGACCAUCUGGGggucaucaucuccuccaaguuaguuauuaauccuuaggaaacacuuggugcuuu
...((((...(((((((((((.((((((...(((((((.........))))).))...)))))).)))).)))))))..)))).......

Structure
----aua    gcu       -    C      CAU  -     uca 
       cagg   uuuccUG GGAU AAUGAC   CU GGGgg   u
       ||||   ||||||| |||| ||||||   || |||||   c
       guuc   aaaggau ccua uuauug   ga ccucc   a
uuucgug    -ac       u    a      auu  a     ucu 


Annotation confidence Not enough data
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Genome context
KE957440.1: 24770-24859 [-]

Database links

Mature pbv-miR-1641-5p

Accession MIMAT0039081
Description Python bivittatus pbv-miR-1641-5p mature miRNA
Sequence 16 - UGGGAUCAAUGACCAUCUGGG - 36
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196