miRBase entry: pbv-mir-599

Stem-loop pbv-mir-599


Accession
MI0030323
Description
Python bivittatus pbv-mir-599 precursor miRNA


Sequence

gaacauccacaguguguuugauaagcugacaugggacaggaauucuuuuucacuGUUGUGUCAAUUUAUCAAACCCauacguggauagcaa
....((((((.((((((((((((((.((((((..((((((((......))).))))))))))).))))))))))..)))))))))).....

Structure
-gaac      a    --          c      gg     -   uu 
     auccac gugu  guuugauaag ugacau  gacag gaa  c
     |||||| ||||  |||||||||| ||||||  ||||| |||   
     uaggug caua  CAAACUAUUU ACUGUG  UUGuc cuu  u
aacga      -    CC          A      --     a   uu 


Annotation confidence Not enough data
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Genome context
KE953831.1: 12509-12599 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from pbv-mir-599
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pbv-miR-599-3p

Accession MIMAT0039070
Description Python bivittatus pbv-miR-599-3p mature miRNA
Sequence 55 - GUUGUGUCAAUUUAUCAAACCC - 76
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196