miRBase entry: pbv-mir-449c

Stem-loop pbv-mir-449c

Accession

MI0030312

Description

Python bivittatus pbv-mir-449c precursor miRNA

Sequence

ugugucacuuUGGCAGUGCAGUACUAGCUGGCUguuuggauaccuucuguguuacagcagcugguugcacuccagagugcugcauuc
((((.((((((((.((((((..((((((((.((((...(((((.....))))))))))))))))))))))))))))))).))))...

Structure

---    u        C      GU        G    uug     c 
   ugug cacuuUGG AGUGCA  ACUAGCUG CUgu   gauac u
   |||| |||||||| ||||||  |||||||| ||||   ||||| u
   acgu gugagacc ucacgu  uggucgac gaca   uugug c
cuu    c        -      --        -    ---     u

Annotation confidence Not enough data

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Genome context

KE953060.1: 287058-287144 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from pbv-mir-449c

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature pbv-miR-449c-5p

Accession	MIMAT0039054
Description	Python bivittatus pbv-miR-449c-5p mature miRNA
Sequence	11 - UGGCAGUGCAGUACUAGCUGGCU - 33
Evidence	experimental Illumina [1]

References

PubMed ID: 24798503
Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
"Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
"Evol Dev (2014) 16:189-196