Stem-loop pbv-mir-208

Accession

MI0030284

Description

Python bivittatus pbv-mir-208 precursor miRNA

Sequence

cuaauggagAAGCUUUUGGCUCGGGUUAUAUuugaaaauggcaguguaUAAGACGAGCAAAAAGCUUGUugguuggaggagaa
(((((.((.((((((((.(((((..(((((((((.......))).))))))..))))).)))))))).)).))))).......

Structure

-------     g  g        G     GG      -   aa 
       cuaau ga AAGCUUUU GCUCG  UUAUAU uug  a
       ||||| || |||||||| |||||  |||||| |||  a
       gguug uU UUCGAAAA CGAGC  AAUaug gac  u
aagagga     g  G        A     AG      u   gg 

Annotation confidence Not enough data

Genome context

KE957541.1: 31771-31853 [-]

Mature pbv-miR-208-5p

• Accession: MIMAT0039012
• Description: Python bivittatus pbv-miR-208-5p mature miRNA
• Sequence: 10 - AAGCUUUUGGCUCGGGUUAUAU - 31
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-208-3p

• Accession: MIMAT0039013
• Description: Python bivittatus pbv-miR-208-3p mature miRNA
• Sequence: 49 - UAAGACGAGCAAAAAGCUUGU - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196