miRBase entry: pbv-mir-199-3

Stem-loop pbv-mir-199-3


Accession
MI0030273
Description
Python bivittatus pbv-mir-199-3 precursor miRNA


Sequence

uccacuccgucuuCCCAGUGUUCGGACUACCUGUUCaggacuacaagauuguACAGUAGUCUGCACAUUGGUUaggcugugcugggauacacagca
........((((..(((((((.((((((((.(((.(((..........))).))))))))))).)))))))..))))..(((((.......)))))

Structure
-----------uccacucc    uC       U        C   U   gacu 
                   gucu  CCAGUGU CGGACUAC UGU Cag    a
                   ||||  ||||||| |||||||| ||| |||     
                   cgga  GGUUACA GUCUGAUG ACA guu    c
acgacacauagggucgugu    UU       C        -   u   agaa 


Annotation confidence Not enough data
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Genome context
KE955379.1: 131002-131097 [+]

Database links

Mature pbv-miR-199-3p

Accession MIMAT0038997
Description Python bivittatus pbv-miR-199-3p mature miRNA
Sequence 53 - ACAGUAGUCUGCACAUUGGUU - 73
Evidence experimental
Illumina [1]

Mature pbv-miR-199-3-5p

Accession MIMAT0038998
Description Python bivittatus pbv-miR-199-3-5p mature miRNA
Sequence 14 - CCCAGUGUUCGGACUACCUGUUC - 36
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196