miRBase entry: pbv-mir-183

Stem-loop pbv-mir-183


Accession
MI0030260
Description
Python bivittatus pbv-mir-183 precursor miRNA


Sequence

uccuguucugugUAUGGCACUGGUAGAAUUCACUGugaaaacacucgaucagugaauuaccaacgggccauaaacggagcagagaaagaacc
(((((((((((.((((((.(((....((((((((((((......)))..))))))))).....))))))))).))))))))).)).......

Structure
-------  -         g      A   -GUAG         --   aa 
       uc cuguucugu UAUGGC CUG     AAUUCACUG  uga  a
       || ||||||||| |||||| |||     |||||||||  |||   
       ag gacgaggca auaccg ggc     uuaagugac  gcu  c
ccaagaa  a         a      -   aacca         ua   ca 


Annotation confidence Not enough data
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Genome context
KE958924.1: 50043-50134 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from pbv-mir-183
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pbv-miR-183-5p

Accession MIMAT0038982
Description Python bivittatus pbv-miR-183-5p mature miRNA
Sequence 13 - UAUGGCACUGGUAGAAUUCACUG - 35
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196