miRBase entry: pbv-mir-181b-2

Stem-loop pbv-mir-181b-2


Accession
MI0030257
Description
Python bivittatus pbv-mir-181b-2 precursor miRNA


Sequence

uggcugcacucaACAUUCAUUGCUGUCGGUGGGUUucggguucagucagcccucuggccaaugaaugcaaacugcggaucaa
((((((((.....(((((((((..(((((.(((((.(.......)..))))).)))))))))))))).....))))).))).

Structure
-   -     cucaA         CU     U     -u gg 
 ugg cugca     CAUUCAUUG  GUCGG GGGUU  c  g
 ||| |||||     |||||||||  ||||| |||||  |  u
 acu ggcgu     guaaguaac  cgguc cccga  g  u
a   a     caaac         --     u     cu ac 


Annotation confidence Not enough data
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Genome context
KE955294.1: 122344-122425 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from pbv-mir-181b-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pbv-miR-181b-5p

Accession MIMAT0038977
Description Python bivittatus pbv-miR-181b-5p mature miRNA
Sequence 13 - ACAUUCAUUGCUGUCGGUGGGUU - 35
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196