miRBase entry: pbv-mir-153-2

Stem-loop pbv-mir-153-2


Accession
MI0030251
Description
Python bivittatus pbv-mir-153-2 precursor miRNA


Sequence

ucucucacagcugccagugUCAUUUUUGUGAUUUGCAGCUaguaauccuggcccagUUGCAUAGUCACAAAAGUGAUCAuuggccacugugccagc
.((..(((((..((((((((((((((((((((((((((((((.....))))).....)))).)))))))))))))).)))))))..)))))..)).

Structure
u  cu     cu       -              -    -----     u 
 cu  cacag  gccagug UCAUUUUUGUGAUU UGCA     GCUag a
 ||  |||||  ||||||| |||||||||||||| ||||     ||||| a
 ga  guguc  cgguuAC AGUGAAAACACUGA ACGU     cgguc u
c  cc     ac       U              U    Ugacc     c 


Annotation confidence Not enough data
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Genome context
KE952971.1: 377740-377835 [+]

Database links

Mature pbv-miR-153-3p

Accession MIMAT0038971
Description Python bivittatus pbv-miR-153-3p mature miRNA
Sequence 57 - UUGCAUAGUCACAAAAGUGAUCA - 79
Evidence experimental
Illumina [1]

Mature pbv-miR-153-2-5p

Accession MIMAT0038972
Description Python bivittatus pbv-miR-153-2-5p mature miRNA
Sequence 20 - UCAUUUUUGUGAUUUGCAGCU - 40
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196