miRBase entry: pbv-mir-147

Stem-loop pbv-mir-147


Accession
MI0030246
Description
Python bivittatus pbv-mir-147 precursor miRNA


Sequence

cacucuaugaaucuaguggaaucacuucugcacaaacuagaggauugaaaccaGUGUGCGGAAAUGCUUCUGCUAcauuuuuagagucuu
.((((((.((((.((((((((.((.((((((((..(((.(.(........))))))))))))).)).)))))))).)))).))))))...

Structure
--c      u    c        u  c        aa   a a gau 
   acucua gaau uaguggaa ca uucugcac  acu g g   u
   |||||| |||| |||||||| || ||||||||  ||| | |    
   ugagau uuua AUCGUCUU GU AAGGCGUG  UGa c c   g
uuc      u    c        C  A        --   - - aaa 


Annotation confidence Not enough data
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Genome context
KE953790.1: 50381-50470 [-]

Database links

Mature pbv-miR-147-3p

Accession MIMAT0038963
Description Python bivittatus pbv-miR-147-3p mature miRNA
Sequence 54 - GUGUGCGGAAAUGCUUCUGCUA - 75
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196