Stem-loop pbv-mir-146a

Accession

MI0030244

Description

Python bivittatus pbv-mir-146a precursor miRNA

Sequence

ugcuuagcucUGAGAACUGAAUUCCAUAGGCUUuagaagaaaugaaacgccccguggauucaguucuacagcuagacagcu
.((((((((...((((((((((.((((.(((((((.......))))..)))..))))))))))))))..)))))...))).

Structure

u   ---     cUG          U    -A   --    ga 
 gcu   uagcu   AGAACUGAAU CCAU  GGC  UUua  a
 |||   |||||   |||||||||| ||||  |||  ||||  g
 cga   aucga   ucuugacuua ggug  ccg  aagu  a
u   cag     -ca          -    cc   ca    aa 

Annotation confidence Not enough data

Genome context

KE953034.1: 15499-15579 [+]

Mature pbv-miR-146a-5p

• Accession: MIMAT0038961
• Description: Python bivittatus pbv-miR-146a-5p mature miRNA
• Sequence: 11 - UGAGAACUGAAUUCCAUAGGCUU - 33
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196