miRBase entry: pbv-mir-144

Stem-loop pbv-mir-144


Accession
MI0030242
Description
Python bivittatus pbv-mir-144 precursor miRNA


Sequence

ggggcuccagcUCGGAUAUCAUCAUAUACUGUAAguuggaaucagacacUACAGUAUAGAUGAUGUACUaucuggagcuccugga
((((((((((.....((((((((.(((((((((.((.(........)))))))))))))))))))).....))))))))))....

Structure
----          cUCGG        A         A  u gaa 
    ggggcuccag     AUAUCAUC UAUACUGUA gu g   u
    ||||||||||     |||||||| ||||||||| || |    
    ccucgagguc     UGUAGUAG AUAUGACAU ca c   c
aggu          uaUCA        -         -  - aga 


Annotation confidence Not enough data
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Genome context
KE957536.1: 98840-98924 [-]

Database links

Mature pbv-miR-144-5p

Accession MIMAT0038957
Description Python bivittatus pbv-miR-144-5p mature miRNA
Sequence 12 - UCGGAUAUCAUCAUAUACUGUAA - 34
Evidence experimental
Illumina [1]

Mature pbv-miR-144-3p

Accession MIMAT0038958
Description Python bivittatus pbv-miR-144-3p mature miRNA
Sequence 50 - UACAGUAUAGAUGAUGUACU - 69
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196