Stem-loop pbv-mir-133a-1

Accession

MI0030228

Description

Python bivittatus pbv-mir-133a-1 precursor miRNA

Sequence

aaugcuuugcuaaAGCUGGUAAAAUGGAACCAAAUcaacuguucaauggaUUUGGUCCCCUUCAACCAGCUGUagcugugcauug
(((((...((((.(((((((..((.((.((((((((............)))))))).)).))..))))))).))))...))))).

Structure

-     uuu    a       AA  U  A        aacug 
 aaugc   gcua AGCUGGU  AA GG ACCAAAUc     u
 |||||   |||| |||||||  || || ||||||||      
 uuacg   cgaU UCGACCA  UU CC UGGUUUag     u
g     ugu    G       AC  C  C        guaac 

Annotation confidence Not enough data

Genome context

KE960125.1: 32110-32194 [-]

Mature pbv-miR-133a-5p

• Accession: MIMAT0038935
• Description: Python bivittatus pbv-miR-133a-5p mature miRNA
• Sequence: 14 - AGCUGGUAAAAUGGAACCAAAU - 35
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-133a-3p

• Accession: MIMAT0038936
• Description: Python bivittatus pbv-miR-133a-3p mature miRNA
• Sequence: 51 - UUUGGUCCCCUUCAACCAGCUGU - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196