Stem-loop sequence pbv-mir-124a-3

Accession

MI0030214 (change log)

Description

Python bivittatus miR-124a-3 stem-loop

Stem-loop

   --cu      aag c   c        a   ga        uaauu 
5'     uggcuu   c cuu guguucac gcg  ccuugauu     u
       ||||||   | ||| |||||||| |||  ||||||||      
3'     accgaa   g gaa cguaagug cgc  ggaauuaa     c
   cugc      -ga a   c        g   ac        cauag 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (Python_molurus_bivittatus-5.0.2; GCA_000186305.2): KE955369.1: 120817-120907 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0030214

Mature sequence pbv-miR-124a-5p

• Accession: MIMAT0038913
• Sequence: 17 - cguguucacagcggaccuugau - 38
• Evidence: experimental; Illumina [1]

Mature sequence pbv-miR-124a-3p

• Accession: MIMAT0038914
• Sequence: 55 - uaaggcacgcggugaaugccaa - 76
• Evidence: experimental; Illumina [1]

References

1. PMID:24798503 "Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles" Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ Evol Dev. 16:189-196(2014).