Stem-loop pbv-mir-124b

Accession

MI0030211

Description

Python bivittatus pbv-mir-124b precursor miRNA

Sequence

caaaggccccucucugCGUGUUCACAGCGGACCUUGAUuuaaauguccauacaauUAAGGCACGCGGUGAAUGCUAAgaacgaggcuggaaa
....((((.(..(((..((((((((.(((..((((((((.............))))))))..))).))))))))..)))..).)))).....

Structure

-caaa    c uc   gC        A   GA        uaaau 
     ggcc c  ucu  GUGUUCAC GCG  CCUUGAUu     g
     |||| |  |||  |||||||| |||  ||||||||     u
     ucgg g  agA  CGUAAGUG CGC  GGAAUuaa     c
aaagg    a ca   AU        G   AC        cauac 

Annotation confidence Not enough data

Genome context

KE954490.1: 31638-31729 [-]

Mature pbv-miR-124b-5p

• Accession: MIMAT0038911
• Description: Python bivittatus pbv-miR-124b-5p mature miRNA
• Sequence: 17 - CGUGUUCACAGCGGACCUUGAU - 38
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-124b-3p

• Accession: MIMAT0038912
• Description: Python bivittatus pbv-miR-124b-3p mature miRNA
• Sequence: 56 - UAAGGCACGCGGUGAAUGCUAA - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196