miRBase entry: pbv-mir-122

Stem-loop pbv-mir-122


Accession
MI0030210
Description
Python bivittatus pbv-mir-122 precursor miRNA


Sequence

uucugcuggagcuuUGGAGUGUGACAAUGGUGUUUGuauccaaucucucaAACGCCAUUAUCACACUAAAUAgcuacuguuaga
.((((.(((((((.(..(((((((.(((((((((((............))))))))))).)))))))..).)))).))).))))

Structure
u    c   -    u GG       C           uaucc 
 ucug ugg agcu U  AGUGUGA AAUGGUGUUUG     a
 |||| ||| |||| |  ||||||| |||||||||||      
 agau guc ucgA A  UCACACU UUACCGCAAac     a
-    u   a    U AA       A           ucucu 


Annotation confidence Not enough data
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Genome context
KE953092.1: 34304-34387 [+]

Database links

Mature pbv-miR-122-5p

Accession MIMAT0038909
Description Python bivittatus pbv-miR-122-5p mature miRNA
Sequence 15 - UGGAGUGUGACAAUGGUGUUUG - 36
Evidence experimental
Illumina [1]

Mature pbv-miR-122-3p

Accession MIMAT0038910
Description Python bivittatus pbv-miR-122-3p mature miRNA
Sequence 51 - AACGCCAUUAUCACACUAAAUA - 72
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196