miRBase entry: pbv-mir-98

Stem-loop pbv-mir-98

Accession

MI0030200

Description

Python bivittatus pbv-mir-98 precursor miRNA

Sequence

gggUGAGGUAGUAAGUUGUAUUGUUgugggguagggauuugugccccaaaucagagauaaCUAUACAACUUACUACUUUCCcu
(((.(((((((((((((((((.(((((((((((........))))))).........)))).)))))))))))))))))))).

Structure

-   U                 U    ---------       ggg 
 ggg GAGGUAGUAAGUUGUAU GUUg         uggggua   a
 ||| ||||||||||||||||| ||||         |||||||    
 cCC UUUCAUCAUUCAACAUA Caau         accccgu   u
u   -                 U    agagacuaa       guu

Annotation confidence Not enough data

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Genome context

KE954158.1: 74651-74733 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pbv-mir-98

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature pbv-miR-98-5p

Accession	MIMAT0038893
Description	Python bivittatus pbv-miR-98-5p mature miRNA
Sequence	4 - UGAGGUAGUAAGUUGUAUUGUU - 25
Evidence	experimental Illumina [1]

Mature pbv-miR-98-3p

Accession	MIMAT0038894
Description	Python bivittatus pbv-miR-98-3p mature miRNA
Sequence	61 - CUAUACAACUUACUACUUUCC - 81
Evidence	experimental Illumina [1]

References

PubMed ID: 24798503
Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
"Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
"Evol Dev (2014) 16:189-196