miRBase entry: pbv-mir-30c-1

Stem-loop pbv-mir-30c-1


Accession
MI0030185
Description
Python bivittatus pbv-mir-30c-1 precursor miRNA


Sequence

UGUAAACAUCCUACACUCUCAGCUguguggaaaagaagaaagCUGGGAGAAGGCUGUUUACUCUcucugcauuggaaa
.(((((((.(((...(((((((((.(.(........).).))))))))).))).))))))).................

Structure
----------------U       U   ACA         g g gga 
                 GUAAACA CCU   CUCUCAGCU u u   a
                 ||||||| |||   ||||||||| | |    
                 CAUUUGU GGA   GAGGGUCga a a   a
aaagguuacgucucUCU       C   --A         a g aga 


Annotation confidence Not enough data
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Genome context
KE957005.1: 55738-55815 [+]

Database links

Mature pbv-miR-30c-5p

Accession MIMAT0038873
Description Python bivittatus pbv-miR-30c-5p mature miRNA
Sequence 1 - UGUAAACAUCCUACACUCUCAGCU - 24
Evidence experimental
Illumina [1]

Mature pbv-miR-30c-3p

Accession MIMAT0038874
Description Python bivittatus pbv-miR-30c-3p mature miRNA
Sequence 43 - CUGGGAGAAGGCUGUUUACUCU - 64
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196