miRBase entry: pbv-mir-29b-2

Stem-loop pbv-mir-29b-2

Accession

MI0030182

Description

Python bivittatus pbv-mir-29b-2 precursor miRNA

Sequence

cuucuucaggaaucugguuucauauggugguuuagauuuaaguacacaauguCUAGCACCAUUUGAAAUCAGUGuuuuugggggaagaau
.(((((((((((((((((((((.((((((..((((((.............)))))))))))).))))))))).)))))))))))).....

Structure

----c            -         u      gu      uuaag 
     uucuucaggaau cugguuuca auggug  uuagau     u
     |||||||||||| ||||||||| ||||||  ||||||     a
     aggggguuuuuG GACUAAAGU UACCAC  GAUCug     c
uaaga            U         U      --      uaaca

Annotation confidence Not enough data

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Genome context

KE956667.1: 9665-9754 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pbv-mir-29b-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature pbv-miR-29b-3p

Accession	MIMAT0038869
Description	Python bivittatus pbv-miR-29b-3p mature miRNA
Sequence	53 - CUAGCACCAUUUGAAAUCAGUG - 74
Evidence	experimental Illumina [1]

References

PubMed ID: 24798503
Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
"Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
"Evol Dev (2014) 16:189-196