Stem-loop sequence pbv-mir-27b

AccessionMI0030178 (change log)
DescriptionPython bivittatus miR-27b stem-loop
Stem-loop 
   -a   c     ag g                  auug        u  uug 
5'   gac ucucu  u aggugcagagcuuagcug    gugaacag ga   a
     ||| |||||  | ||||||||||||||||||    |||||||| ||   u
3'   uug agaga  a uccacgucuugaaucggu    cacuuguu cu   u
   ag   a     -- g                  --ga        u  ccu
Get sequence
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Python_molurus_bivittatus-5.0.2; GCA_000186305.2) Overlapping transcripts
KE954626.1: 204871-204970 [+]
intergenic
Clustered miRNAs
< 10kb from pbv-mir-27b
pbv-mir-23bKE954626.1: 204669-204758 [+]
pbv-mir-27bKE954626.1: 204871-204970 [+]
pbv-mir-24-1KE954626.1: 205419-205498 [+]
Database links

Mature sequence pbv-miR-27b-5p

Accession MIMAT0038863
Sequence

21 -  

agagcuuagcugauuggugaaca

 - 43

Get sequence
Evidence experimental; Illumina [1]

Mature sequence pbv-miR-27b-3p

Accession MIMAT0038864
Sequence

63 -  

uucacaguggcuaaguucugc

 - 83

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:24798503 "Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles" Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ Evol Dev. 16:189-196(2014).