miRBase entry: pbv-mir-9-3

Stem-loop pbv-mir-9-3


Accession
MI0030151
Description
Python bivittatus pbv-mir-9-3 precursor miRNA


Sequence

agggccguuucugUCUUUGGUUAUCUAGCUGUAUGaguguuaucaagccaucaUAAAGCUAGAUAACCGAAAGUAgaaaugacu
.....((((((((.((((((((((((((((.(((((..(((....)))..))))).)))))))))))).))))))))))))...

Structure
agggc        U    -            G     gu   a 
     cguuucug CUUU GGUUAUCUAGCU UAUGa  guu u
     |||||||| |||| |||||||||||| |||||  |||  
     guaaagAU GAAA CCAAUAGAUCGA AUacu  cga c
--uca        -    G            A     ac   a 


Annotation confidence Not enough data
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Genome context
KE955498.1: 5666-5749 [+]

Database links

Mature pbv-miR-9-5p

Accession MIMAT0038821
Description Python bivittatus pbv-miR-9-5p mature miRNA
Sequence 14 - UCUUUGGUUAUCUAGCUGUAUG - 35
Evidence experimental
Illumina [1]

Mature pbv-miR-9-3p

Accession MIMAT0038822
Description Python bivittatus pbv-miR-9-3p mature miRNA
Sequence 54 - UAAAGCUAGAUAACCGAAAGUA - 75
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196