miRBase entry: pbv-mir-1a-1

Stem-loop pbv-mir-1a-1


Accession
MI0030143
Description
Python bivittatus pbv-mir-1a-1 precursor miRNA


Sequence

accugcuugagugaCAUACUUCUUUAUAUGCCCAUAugaaccuggcaaacuaUGGAAUGUAAAGAAGUAUGUAuuucaggcaugga
.((((((((((..((((((((((((((((..(((((..............))))).))))))))))))))))..)))))))).)).

Structure
a  -        ug                GC     ugaacc 
 cc ugcuugag  aCAUACUUCUUUAUAU  CCAUA      u
 || ||||||||  ||||||||||||||||  |||||       
 gg acggacuu  UGUAUGAAGAAAUGUA  GGUau      g
a  u        uA                -A     caaacg 


Annotation confidence Not enough data
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Genome context
KE957326.1: 96514-96599 [+]

Database links

Mature pbv-miR-1a-5p

Accession MIMAT0038812
Description Python bivittatus pbv-miR-1a-5p mature miRNA
Sequence 15 - CAUACUUCUUUAUAUGCCCAUA - 36
Evidence experimental
Illumina [1]

Mature pbv-miR-1a-3p

Accession MIMAT0038813
Description Python bivittatus pbv-miR-1a-3p mature miRNA
Sequence 53 - UGGAAUGUAAAGAAGUAUGUA - 73
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196