miRBase entry: pbv-let-7a-3

Stem-loop pbv-let-7a-3

Accession

MI0030132

Description

Python bivittatus pbv-let-7a-3 precursor miRNA

Sequence

aggUGAGGUAGUAGGUUGUAUAGUUugugggagggauuauaucccauuucaggugauaacuauacagucuauugccuuccuua
(((.((((((((((((((((((((((.((((((((((...))))).))))).)....))))))))))))))))))))))))..

Structure

--   U                     ---- g     -     u 
  agg GAGGUAGUAGGUUGUAUAGUU    u uggga gggau  
  ||| |||||||||||||||||||||    | ||||| ||||| a
  ucc uuccguuaucugacauaucaa    g acuuu cccua  
au   -                     uagu g     a     u

Annotation confidence Not enough data

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Genome context

KE953223.1: 219104-219186 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pbv-let-7a-3

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature pbv-let-7a-5p

Accession	MIMAT0038793
Description	Python bivittatus pbv-let-7a-5p mature miRNA
Sequence	4 - UGAGGUAGUAGGUUGUAUAGUU - 25
Evidence	experimental Illumina [1]

References

PubMed ID: 24798503
Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
"Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
"Evol Dev (2014) 16:189-196