Stem-loop cli-mir-9649

Accession

MI0030129

Description

Columba livia cli-mir-9649 precursor miRNA

Sequence

gaagguaaagaaguuaCACUGGGUCUCCCACAUCUCUGgugagauuuuuagcuacaGAGAUGCUGGGUGAAACAGUGUaucuucauaucagu
...((((..((((.(((((((..((.((((((((((((................)))))))).)))).))..))))))).)))).))))...

Structure

gaa    aa    u       GG  U    -        gugagau 
   ggua  gaag uaCACUG  UC CCCA CAUCUCUG       u
   ||||  |||| |||||||  || |||| ||||||||        
   cuau  cuuc aUGUGAC  AG GGGU GUAGAGac       u
uga    -a    u       AA  U    C        aucgauu 

Annotation confidence Not enough data

Genome context

KB376086.1: 255207-255298 [-]

Mature cli-miR-9649-5p

• Accession: MIMAT0038791
• Description: Columba livia cli-miR-9649-5p mature miRNA
• Sequence: 17 - CACUGGGUCUCCCACAUCUCUG - 38
• Evidence: experimental ; Illumina [1]

Mature cli-miR-9649-3p

• Accession: MIMAT0038792
• Description: Columba livia cli-miR-9649-3p mature miRNA
• Sequence: 57 - GAGAUGCUGGGUGAAACAGUGU - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196