miRBase entry: cli-mir-9648

Stem-loop cli-mir-9648


Accession
MI0030128
Description
Columba livia cli-mir-9648 precursor miRNA


Sequence

agaggccaucuCAUGCCAUUAAUUUCUAAGCAgucaaugaggaauucugCUGUAGAAUUAAUGGCAAAAUauggcccac
...((((((....(((((((((((.((((((((.............))))).))))))))))))))....))))))...

Structure
aga      cuCA           U   -     ucaau 
   ggccau    UGCCAUUAAUU CUA AGCAg     g
   ||||||    ||||||||||| ||| |||||     a
   ccggua    ACGGUAAUUAA GAU UCguc     g
cac      UAAA           -   G     uuaag 


Annotation confidence Not enough data
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Genome context
KB375520.1: 298713-298791 [-]

Database links

Mature cli-miR-9648-5p

Accession MIMAT0038789
Description Columba livia cli-miR-9648-5p mature miRNA
Sequence 12 - CAUGCCAUUAAUUUCUAAGCA - 32
Evidence experimental
Illumina [1]

Mature cli-miR-9648-3p

Accession MIMAT0038790
Description Columba livia cli-miR-9648-3p mature miRNA
Sequence 50 - CUGUAGAAUUAAUGGCAAAAU - 70
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196