Stem-loop cli-mir-9643

Accession

MI0030123

Description

Columba livia cli-mir-9643 precursor miRNA

Sequence

cugugguaccgacccugCGCGGCCGGUACUGAUCCUGCAguaccaacccugUGCGGCCGGUACUGACCCUGCAuggcugguaccaauc
...((((((((.((.((((.((.((((((((..(((((((........))))).)).)))))))).)).)))).)).))))))))...

Structure

cug        a  c    C  C        AU  -     uac 
   ugguaccg cc ugCG GG CGGUACUG  CC UGCAg   c
   |||||||| || |||| || ||||||||  || |||||    
   accauggu gg ACGU CC GUCAUGGC  GG GUguc   a
cua        c  u    C  A        -C  C     cca 

Annotation confidence Not enough data

Genome context

KB375451.1: 66187-66274 [+]

Mature cli-miR-9643-5p

• Accession: MIMAT0038779
• Description: Columba livia cli-miR-9643-5p mature miRNA
• Sequence: 18 - CGCGGCCGGUACUGAUCCUGCA - 39
• Evidence: experimental ; Illumina [1]

Mature cli-miR-9643-3p

• Accession: MIMAT0038780
• Description: Columba livia cli-miR-9643-3p mature miRNA
• Sequence: 52 - UGCGGCCGGUACUGACCCUGCA - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196