Stem-loop cli-mir-9640

Accession

MI0030120

Description

Columba livia cli-mir-9640 precursor miRNA

Sequence

cacgggcggcaGAGCCUCGCGCUGACUCUGAAGguucugguaacucgacuUCAGAUGGCAGAGCUGAGGCUGCgccgcucgcu
..((((((((..((((((((.(((.((((((((...............))))))).).))).)).))))))..))))))))..

Structure

ca        aG      -  G   A -       guucug 
  cgggcggc  AGCCUC GC CUG C UCUGAAG      g
  ||||||||  |||||| || ||| | |||||||      u
  gcucgccg  UCGGAG CG GAC G AGACUuc      a
uc        CG      U  A   G U       agcuca 

Annotation confidence Not enough data

Genome context

KB375952.1: 20863-20945 [+]

Mature cli-miR-9640-5p

• Accession: MIMAT0038773
• Description: Columba livia cli-miR-9640-5p mature miRNA
• Sequence: 12 - GAGCCUCGCGCUGACUCUGAAG - 33
• Evidence: experimental ; Illumina [1]

Mature cli-miR-9640-3p

• Accession: MIMAT0038774
• Description: Columba livia cli-miR-9640-3p mature miRNA
• Sequence: 51 - UCAGAUGGCAGAGCUGAGGCUGC - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196