miRBase entry: cli-mir-9635

Stem-loop cli-mir-9635


Accession
MI0030115
Description
Columba livia cli-mir-9635 precursor miRNA


Sequence

cugagcaaccugaagcaUAUUUAUACAGAUUAAGUGGUUUCuaauacuccaaagAGCACUUAAUCUGCAUGAAUGUGcuucauguugcuaugu
...((((((.((((((((((((((.(((((((((((.(((............))).))))))))))).)))))))))))))).))))))....

Structure
-cug      c              A           G   Cuaau 
    agcaac ugaagcaUAUUUAU CAGAUUAAGUG UUU     a
    |||||| |||||||||||||| ||||||||||| |||      
    ucguug acuucGUGUAAGUA GUCUAAUUCAC Aga     c
ugua      u              C           G   aaccu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
KB375839.1: 451089-451181 [+]

Database links

Mature cli-miR-9635-5p

Accession MIMAT0038763
Description Columba livia cli-miR-9635-5p mature miRNA
Sequence 18 - UAUUUAUACAGAUUAAGUGGUUUC - 41
Evidence experimental
Illumina [1]

Mature cli-miR-9635-3p

Accession MIMAT0038764
Description Columba livia cli-miR-9635-3p mature miRNA
Sequence 55 - AGCACUUAAUCUGCAUGAAUGUG - 77
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196