Stem-loop cli-mir-1729

Accession

MI0030076

Description

Columba livia cli-mir-1729 precursor miRNA

Sequence

uagacaggccugauccugcAUCCCUUACUCACGUGAGCAGUCgucucuauuucacgggaCUACUCGGUGAGUAAGGAUCGCaggacugggaccacuacc
......((((((.((((((((((.((((((((.((((.((((...............)))).)))))))))))))))).)))))).)))).))......

Structure

uagaca  -    a      -    C        G    C    gucucu 
      gg ccug uccugc AUCC UUACUCAC UGAG AGUC      a
      || |||| |||||| |||| |||||||| |||| ||||      u
      cc gggu aggaCG UAGG AAUGAGUG GCUC UCag      u
ccauca  a    c      C    -        -    A    ggcacu 

Annotation confidence Not enough data

Genome context

KB375297.1: 27889-27987 [+]

Mature cli-miR-1729-5p

• Accession: MIMAT0038695
• Description: Columba livia cli-miR-1729-5p mature miRNA
• Sequence: 20 - AUCCCUUACUCACGUGAGCAGUC - 42
• Evidence: experimental ; Illumina [1]

Mature cli-miR-1729-3p

• Accession: MIMAT0038696
• Description: Columba livia cli-miR-1729-3p mature miRNA
• Sequence: 60 - CUACUCGGUGAGUAAGGAUCGC - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196