Stem-loop cli-mir-1559

Accession

MI0030070

Description

Columba livia cli-mir-1559 precursor miRNA

Sequence

acaugaaggucuagacuccuUUCGAUGCUUGUAUGCUACUCCcaagaaugcuaacaggagUUCCAUGUAUGCAUCGAGCAGagacuauaccauuuaaacu
...(((((((.(((.(((..((((((((.((((((..(((((..............)))))..)))))).))))))))..))).))).))).))))....

Structure

-aca    -   c   a   cu        U      CU     caagaa 
    ugaa ggu uag cuc  UUCGAUGC UGUAUG  ACUCC      u
    |||| ||| ||| |||  |||||||| ||||||  |||||       
    auuu cca auc gaG  GAGCUACG AUGUAC  Ugagg      g
ucaa    a   u   a   AC        U      CU     acaauc 

Annotation confidence Not enough data

Genome context

KB375430.1: 524646-524745 [-]

Mature cli-miR-1559-5p

• Accession: MIMAT0038685
• Description: Columba livia cli-miR-1559-5p mature miRNA
• Sequence: 21 - UUCGAUGCUUGUAUGCUACUCC - 42
• Evidence: experimental ; Illumina [1]

Mature cli-miR-1559-3p

• Accession: MIMAT0038686
• Description: Columba livia cli-miR-1559-3p mature miRNA
• Sequence: 61 - UUCCAUGUAUGCAUCGAGCAG - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196