miRBase entry: cli-mir-458

Stem-loop cli-mir-458


Accession
MI0030050
Description
Columba livia cli-mir-458 precursor miRNA


Sequence

cguggugcagauggcAGCGCCAUUUCCAGAGCUAUAAacagucucauugucAUAGCUCUUUGAAUGGUACUGCcauauguaccgga
..(((((((.(((((((.(((((((..((((((((..(((((...))))).))))))))..))))))).))))))).)))))))..

Structure
cg       g       C       CC        AA     c 
  uggugca auggcAG GCCAUUU  AGAGCUAU  acagu  
  ||||||| ||||||| |||||||  ||||||||  ||||| u
  gccaugu uacCGUC UGGUAAG  UCUCGAUA  uguua  
ag       a       A       UU        -c     c 


Annotation confidence Not enough data
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Genome context
KB375905.1: 126017-126102 [+]

Database links

Mature cli-miR-458-5p

Accession MIMAT0038649
Description Columba livia cli-miR-458-5p mature miRNA
Sequence 16 - AGCGCCAUUUCCAGAGCUAUAA - 37
Evidence experimental
Illumina [1]

Mature cli-miR-458-3p

Accession MIMAT0038650
Description Columba livia cli-miR-458-3p mature miRNA
Sequence 52 - AUAGCUCUUUGAAUGGUACUGC - 73
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196