miRBase entry: cli-mir-449a

Stem-loop cli-mir-449a

Accession

MI0030042

Description

Columba livia cli-mir-449a precursor miRNA

Sequence

aucugugugggaugggaUGGCAGUGUGUGUUAGCUGGUugaaauucugacaucagcuaacaugcaguugcuauccuuuuccacauaccu
...(((((((((.(((((((((((((((((((((((((............))))))))))))))).)))))))))).)))))))))...

Structure

auc         u          -               ugaaa 
   uguguggga gggaUGGCAG UGUGUGUUAGCUGGU     u
   ||||||||| |||||||||| |||||||||||||||      
   auacaccuu uccuaucguu acguacaaucgacua     u
ucc         u          g               caguc

Annotation confidence Not enough data

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Genome context

KB375359.1: 2803138-2803226 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from cli-mir-449a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cli-miR-449a-5p

Accession	MIMAT0038636
Description	Columba livia cli-miR-449a-5p mature miRNA
Sequence	18 - UGGCAGUGUGUGUUAGCUGGU - 38
Evidence	experimental Illumina [1]

References

PubMed ID: 24798503
Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
"Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
"Evol Dev (2014) 16:189-196