miRBase entry: cli-mir-383

Stem-loop cli-mir-383


Accession
MI0030039
Description
Columba livia cli-mir-383 precursor miRNA


Sequence

accugcuccuCAGAUCAGAAGGUGAUUGUGGCUuugaauagcuauuaagcagCCACAGCACUACCUGGUCAGAaagagcaagu
...(((((.((.((((((..((((.((((((((.......(((....)))))))))))))))..)))))).))..)))))...

Structure
acc     -c  A      AA    A        uugaaua   a 
   ugcuc  uC GAUCAG  GGUG UUGUGGCU       gcu u
   |||||  || ||||||  |||| ||||||||       |||  
   acgag  AG CUGGUC  UCAC GACACCga       cga u
uga     aa  A      CA    -        -------   a 


Annotation confidence Not enough data
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Genome context
KB375368.1: 1608633-1608715 [+]

Database links

Mature cli-miR-383-5p

Accession MIMAT0038630
Description Columba livia cli-miR-383-5p mature miRNA
Sequence 11 - CAGAUCAGAAGGUGAUUGUGGCU - 33
Evidence experimental
Illumina [1]

Mature cli-miR-383-3p

Accession MIMAT0038631
Description Columba livia cli-miR-383-3p mature miRNA
Sequence 53 - CCACAGCACUACCUGGUCAGA - 73
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196