miRBase entry: cli-mir-302a

Stem-loop cli-mir-302a

Accession

MI0030028

Description

Columba livia cli-mir-302a precursor miRNA

Sequence

ccauaacuuaaauguggauguacuugcuuuguuccugaaaaguAAGUGCUUCCAUGUUUUGGUGAUgg
((((.(((.(((((((((.(((((((((((........))))))))))).))))))))).))).))))

Structure

    a   u         u           guu 
ccau acu aaaugugga guacuugcuuu   c
|||| ||| ||||||||| |||||||||||    
ggUA UGG UUUGUACCU CGUGAAugaaa   c
    G   U         U           agu

Annotation confidence Not enough data

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Genome context

KB376606.1: 1626446-1626513 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from cli-mir-302a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cli-miR-302a-3p

Accession	MIMAT0038615
Description	Columba livia cli-miR-302a-3p mature miRNA
Sequence	44 - AAGUGCUUCCAUGUUUUGGUGAU - 66
Evidence	experimental Illumina [1]

References

PubMed ID: 24798503
Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
"Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
"Evol Dev (2014) 16:189-196