miRBase entry: cli-mir-204-1

Stem-loop cli-mir-204-1


Accession
MI0030008
Description
Columba livia cli-mir-204-1 precursor miRNA


Sequence

ucaugugacccguggacUUCCCUUUGUCAUCCUAUGCCUgagaauauaugaaggggGCUGGGAAGGCAAAGGGACGUucaacugucaucacugg
....(((((...(((((.((((((((((.(((((.((((...............))))))))).)))))))))).)))))...)))))......

Structure
--ucau     ccg     U          A     U    gagaau 
      gugac   uggac UCCCUUUGUC UCCUA GCCU      a
      |||||   ||||| |||||||||| ||||| ||||      u
      uacug   acuUG AGGGAAACGG AGGGU CGgg      a
ggucac     uca     C          A     -    ggaagu 


Annotation confidence Not enough data
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Genome context
KB375428.1: 920641-920734 [+]

Database links

Mature cli-miR-204-5p

Accession MIMAT0038580
Description Columba livia cli-miR-204-5p mature miRNA
Sequence 18 - UUCCCUUUGUCAUCCUAUGCCU - 39
Evidence experimental
Illumina [1]

Mature cli-miR-204-3p

Accession MIMAT0038581
Description Columba livia cli-miR-204-3p mature miRNA
Sequence 57 - GCUGGGAAGGCAAAGGGACGU - 77
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196