miRBase entry: cli-mir-202

Stem-loop cli-mir-202


Accession
MI0030007
Description
Columba livia cli-mir-202 precursor miRNA


Sequence

ugacucguuguuccuuuUUCCUAUGCAUAUACUUCUUUgagaauuugaucuaaagaggcauagggcaugggaaaauggggcgacugaggua
...(((((((((((.(((((((((((.(((.(((((((.(((......)))))))))).)))..))))))))))).)))))))).)))...

Structure
uga   -        u           -A   A       g   au 
   cuc guuguucc uuUUCCUAUGC  UAU CUUCUUU aga  u
   ||| |||||||| |||||||||||  ||| ||||||| |||   
   gag cagcgggg aaaaggguacg  aua ggagaaa ucu  u
aug   u        u           gg   c       -   ag 


Annotation confidence Not enough data
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Genome context
KB375535.1: 1438264-1438354 [+]

Database links

Mature cli-miR-202-5p

Accession MIMAT0038579
Description Columba livia cli-miR-202-5p mature miRNA
Sequence 18 - UUCCUAUGCAUAUACUUCUUU - 38
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196