miRBase entry: cli-mir-92-2

Stem-loop cli-mir-92-2


Accession
MI0029943
Description
Columba livia cli-mir-92-2 precursor miRNA


Sequence

ugguuucuccauGGGUGGGGAUUUGUUGCAUUACUuguagcuguauguagagUAUUGCACUUGUCCCGGCCUGUggaggaaaug
...(((((((((((((.(((((..((.(((.(((((...((.....)).))))).)))))..))))).)))))))))))))...

Structure
ugg             G     UU  U   U     gua  u 
   uuucuccauGGGU GGGAU  GU GCA UACUu   gc g
   ||||||||||||| |||||  || ||| |||||   || u
   aaggaggUGUCCG CCCUG  CA CGU AUgag   ug a
gua             G     UU  -   U     --a  u 


Annotation confidence Not enough data
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Genome context
KB375349.1: 3451812-3451895 [-]
Clustered miRNAs
5 other miRNAs are < 10 kb from cli-mir-92-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cli-miR-92-3p

Accession MIMAT0038474
Description Columba livia cli-miR-92-3p mature miRNA
Sequence 53 - UAUUGCACUUGUCCCGGCCUGU - 74
Evidence experimental
Illumina [1]

Mature cli-miR-92-2-5p

Accession MIMAT0038475
Description Columba livia cli-miR-92-2-5p mature miRNA
Sequence 13 - GGGUGGGGAUUUGUUGCAUUACU - 35
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196