miRBase entry: cli-mir-29a-2

Stem-loop cli-mir-29a-2


Accession
MI0029927
Description
Columba livia cli-mir-29a-2 precursor miRNA


Sequence

augucucuuacacaggcugaccgauuucucuugguguucagagucucaguuuuugucUAGCACCAUUUGAAAUCGGUUAugauguagggggaaa
...(((((((((((...(((((((((((...(((((((.(((.............))))))))))...))))))))))))).)))))))))...

Structure
aug         -  ggc           ucu       c   gucuc 
   ucucuuaca ca   ugaccgauuuc   ugguguu aga     a
   ||||||||| ||   |||||||||||   ||||||| |||     g
   gggggaugu gu   AUUGGCUAAAG   ACCACGA Ucu     u
aaa         a  ---           UUU       -   guuuu 


Annotation confidence Not enough data
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Genome context
KB375734.1: 2207688-2207781 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cli-mir-29a-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cli-miR-29a-3p

Accession MIMAT0038448
Description Columba livia cli-miR-29a-3p mature miRNA
Sequence 58 - UAGCACCAUUUGAAAUCGGUUA - 79
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196