Stem-loop sequence cli-mir-10c

Accession

MI0029905 (change log)

Description

Columba livia miR-10c stem-loop

Stem-loop

   ccc    u         a    g    cu          ----u     
5'    cguc ccuauaugu cccu uaga  cgaauuugug     gagc 
      |||| ||||||||| |||| ||||  ||||||||||     ||| g
3'    guag ggguauaua gggg aucu  gcuuaaacac     cucu 
   acc    c         a    -    cu          ugacc     

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (CLiv1.0; GCA_000337935.1): KB376284.1: 255100-255191 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0029905

Mature sequence cli-miR-10c-5p

• Accession: MIMAT0038408
• Sequence: 17 - uacccuguagacucgaauuug - 37
• Evidence: experimental; Illumina [1]

Mature sequence cli-miR-10c-3p

• Accession: MIMAT0038409
• Sequence: 57 - caaauucgucucuaggggaaua - 78
• Evidence: experimental; Illumina [1]

References

1. PMID:24798503 "Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles" Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ Evol Dev. 16:189-196(2014).