miRBase entry: cli-mir-9-2

Stem-loop cli-mir-9-2


Accession
MI0029901
Description
Columba livia cli-mir-9-2 precursor miRNA


Sequence

agggaagugaguuguuaUCUUUGGUUAUCUAGCUGUAUGAguguuuuggucuucAUAAAGCUAGAUAACCGAAAGUAaaaacuccuucaag
...((((.(((((.((((.(((((((((((((((.((((((.(.......))))))).))))))))))))))).)))).)))))))))...

Structure
agg    u     g    C               G      u uu 
   gaag gaguu uuaU UUUGGUUAUCUAGCU UAUGAg g  u
   |||| ||||| |||| ||||||||||||||| |||||| |  u
   cuuc cucaa aAUG AAGCCAAUAGAUCGA AUAcuu c  g
gaa    -     a    A               A      - ug 


Annotation confidence Not enough data
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Genome context
KB375452.1: 234173-234263 [-]

Database links

Mature cli-miR-9-5p

Accession MIMAT0038401
Description Columba livia cli-miR-9-5p mature miRNA
Sequence 18 - UCUUUGGUUAUCUAGCUGUAUGA - 40
Evidence experimental
Illumina [1]

Mature cli-miR-9-3p

Accession MIMAT0038402
Description Columba livia cli-miR-9-3p mature miRNA
Sequence 55 - AUAAAGCUAGAUAACCGAAAGUA - 77
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196