miRBase entry: cli-mir-9-1

Stem-loop cli-mir-9-1


Accession
MI0029900
Description
Columba livia cli-mir-9-1 precursor miRNA


Sequence

ucagggguugguuguuaUCUUUGGUUAUCUAGCUGUAUGAguggugucgauucuucAUAAAGCUAGAUAACCGAAAGUAaaaauaaccccauu
...(((((((....((((.(((((((((((((((.((((((.(((....))).)))))).))))))))))))))).))))...)))))))...

Structure
uca       guug    C               G      u   g 
   gggguug    uuaU UUUGGUUAUCUAGCU UAUGAg ggu u
   |||||||    |||| ||||||||||||||| |||||| |||  
   ccccaau    aAUG AAGCCAAUAGAUCGA AUAcuu uua c
uua       -aaa    A               A      c   g 


Annotation confidence Not enough data
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Genome context
KB375676.1: 120312-120404 [-]

Database links

Mature cli-miR-9-5p

Accession MIMAT0038401
Description Columba livia cli-miR-9-5p mature miRNA
Sequence 18 - UCUUUGGUUAUCUAGCUGUAUGA - 40
Evidence experimental
Illumina [1]

Mature cli-miR-9-3p

Accession MIMAT0038402
Description Columba livia cli-miR-9-3p mature miRNA
Sequence 57 - AUAAAGCUAGAUAACCGAAAGUA - 79
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196