miRBase entry: cli-mir-7a-1

Stem-loop cli-mir-7a-1


Accession
MI0029896
Description
Columba livia cli-mir-7a-1 precursor miRNA


Sequence

guuggucuaguucugugUGGAAGACUAGUGAUUUUGUUGUUuuuagauaacuaaauugaCAACAAAUCGCAGUCUGCCAUAuagcacagacugug
...(((((.((.((((((((.(((((.(((((((.(((((((((((....)))))..)))))))))))))))))).)))))))).)))))))...

Structure
guu     a  u        A     A       U      --     a 
   ggucu gu cugugUGG AGACU GUGAUUU GUUGUU  uuuag u
   ||||| || |||||||| ||||| ||||||| ||||||  |||||  
   ucaga ca gauAUACC UCUGA CGCUAAA CAACag  aaauc a
gug     -  c        G     -       -      uu     a 


Annotation confidence Not enough data
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Genome context
KB375705.1: 147000-147094 [+]

Database links

Mature cli-miR-7a-5p

Accession MIMAT0038396
Description Columba livia cli-miR-7a-5p mature miRNA
Sequence 18 - UGGAAGACUAGUGAUUUUGUUGUU - 41
Evidence experimental
Illumina [1]

Mature cli-miR-7a-3p

Accession MIMAT0038397
Description Columba livia cli-miR-7a-3p mature miRNA
Sequence 60 - CAACAAAUCGCAGUCUGCCAUA - 81
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196