miRBase entry: cli-let-7a-3

Stem-loop cli-let-7a-3

Accession

MI0029884

Description

Columba livia cli-let-7a-3 precursor miRNA

Sequence

guccuuuggggUGAGGUAGUAGGUUGUAUAGUUuuagggcucugcccugccugucacauaaCUAUACAAUCUACUGUCUUUCcugaagugg
...((((((((.(((((((((((((((((((((.((((((...))))))..........)))))))))))))))))))))))))))))...

Structure

guc        U                     ---------u      u 
   cuuugggg GAGGUAGUAGGUUGUAUAGUU          uagggc  
   |||||||| |||||||||||||||||||||          |||||| c
   gaagucCU UUCUGUCAUCUAACAUAUCaa          gucccg  
ggu        -                     uacacugucc      u

Annotation confidence Not enough data

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Genome context

KB375672.1: 360757-360847 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cli-let-7a-3

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cli-let-7a-5p

Accession	MIMAT0038374
Description	Columba livia cli-let-7a-5p mature miRNA
Sequence	12 - UGAGGUAGUAGGUUGUAUAGUU - 33
Evidence	experimental Illumina [1]

Mature cli-let-7a-3p

Accession	MIMAT0038375
Description	Columba livia cli-let-7a-3p mature miRNA
Sequence	62 - CUAUACAAUCUACUGUCUUUC - 82
Evidence	experimental Illumina [1]

References

PubMed ID: 24798503
Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
"Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
"Evol Dev (2014) 16:189-196