miRBase entry: ami-mir-9610

Stem-loop ami-mir-9610


Accession
MI0029877
Description
Alligator mississippiensis ami-mir-9610 precursor miRNA


Sequence

uaaccuugUGUGACAGUAACUCCUUCUAGGaacaugugcauccagcuuuCCAGGAGGCUGUCUGUCACACCAggaaa
...(((.(((((((((.....((((((.((((..((......))...))))))))))....))))))))).)))...

Structure
uaa   u         UAACU      A    -ca  ug 
   ccu gUGUGACAG     CCUUCU GGaa   ug  c
   ||| |||||||||     |||||| ||||   ||   
   ggA CACACUGUC     GGAGGA CCuu   ac  a
aaa   C         -UGUC      -    ucg  cu 


Annotation confidence Not enough data
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Genome context
AKHW03005076.1: 302363-302439 [+]

Database links

Mature ami-miR-9610-5p

Accession MIMAT0038364
Description Alligator mississippiensis ami-miR-9610-5p mature miRNA
Sequence 9 - UGUGACAGUAACUCCUUCUAGG - 30
Evidence experimental
Illumina [1]

Mature ami-miR-9610-3p

Accession MIMAT0038365
Description Alligator mississippiensis ami-miR-9610-3p mature miRNA
Sequence 50 - CCAGGAGGCUGUCUGUCACACCA - 72
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196