miRBase entry: ami-mir-9605

Stem-loop ami-mir-9605


Accession
MI0029872
Description
Alligator mississippiensis ami-mir-9605 precursor miRNA


Sequence

gucccaaauacacugcUGGAGUCAGUGGGUACAAGUCUguggagcugauagAGUUGUACAUGUUGACACAAGCagugaauuuggccg
...((((((.(((((((...(((((...((((((.(((((.......))))).))))))...)))))...))))))).))))))...

Structure
guc      a       GGA     UGG      G     gg 
   ccaaau cacugcU   GUCAG   GUACAA UCUgu  a
   |||||| |||||||   |||||   |||||| |||||  g
   gguuua gugaCGA   CAGUU   CAUGUU Agaua  c
gcc      a       ACA     GUA      G     gu 


Annotation confidence Not enough data
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Genome context
AKHW03001210.1: 22946223-22946309 [+]

Database links

Mature ami-miR-9605-5p

Accession MIMAT0038354
Description Alligator mississippiensis ami-miR-9605-5p mature miRNA
Sequence 17 - UGGAGUCAGUGGGUACAAGUCU - 38
Evidence experimental
Illumina [1]

Mature ami-miR-9605-3p

Accession MIMAT0038355
Description Alligator mississippiensis ami-miR-9605-3p mature miRNA
Sequence 52 - AGUUGUACAUGUUGACACAAGC - 73
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196