Stem-loop ami-mir-3618

Accession

MI0029864

Description

Alligator mississippiensis ami-mir-3618 precursor miRNA

Sequence

gaaugcauugugauuuccaauaauugagacagugauucugaaagcUGUCUACAUUAAUGAAAAGAACaauguaguca
((.((((((((..(((.((.((((..(((((((..........)))))))..)))).)).)))..)))))))).)).

Structure

-  a        ga   c  a    ug       gauu 
 ga ugcauugu  uuu ca uaau  agacagu    c
 || ||||||||  ||| || ||||  |||||||     
 cu auguaaCA  AAA GU AUUA  UCUGUcg    u
a  g        AG   A  A    CA       aaag 

Annotation confidence Not enough data

Genome context

AKHW03002185.1: 1827855-1827931 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ami-mir-3618

Mature ami-miR-3618-3p

• Accession: MIMAT0038339
• Description: Alligator mississippiensis ami-miR-3618-3p mature miRNA
• Sequence: 46 - UGUCUACAUUAAUGAAAAGAAC - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196